BioAssay Ontology
type: Ontology
license: https://creativecommons.org/licenses/by-sa/4.0/
version info: 2.7.2
label: BAO
comment: Created by: Hande Küçük McGinty, Janice Kranz, Joseph Ostrow, Alex Clark, Yu Lin, Saminda Abeyruwan, Uma Vempati, Kunie Sakurai, Vance Lemmon, Ubbo Visser, John Turner, Stephan Schurer*
comment: Contact: Stephan Schurer stephan dot schurer at gmail dot com
date: 8 Jul 2021

cell phenotype
type: Class

molecular phenotype
type: Class
IAO_0000115: The molecular characteristics of a cell of tissue including expressed coding and non-coding RNAs, proteins and their post-translational modifications, lipids, carbohydrates and small molecules that characterize the state in a cell or tissue and that result from the interaction of its genotype and the environment.
subclass of: cell phenotype

morphological phenotype
type: Class
IAO_0000115: The form and structure of an organism and its parts, including cells, that result from the interaction of its genotype and the environment.
subclass of: cell phenotype

biochemical phenotype
type: Class
IAO_0000115: The proteins and their post-translational modifications, lipids, carbohydrates and small molecules that characterize the state in a cell or tissue and that result from the interaction of its genotype and the environment.
subclass of: molecular phenotype

transcriptional phenotype
type: Class
IAO_0000115: The coding and non-coding RNAs expressed in a cell or tissue that result from the interaction of its genotype and the environment.
subclass of: molecular phenotype

cellular state phenotype
type: Class
subclass of: cell phenotype

autophagic cell phenotype
type: Class
subclass of: cellular state phenotype

inflamed cell phenotype
type: Class
subclass of: cellular state phenotype

inflamed blood vessel cell phenotype
type: Class
subclass of: inflamed cell phenotype

neuronal cell phenotype
type: Class
subclass of: cellular state phenotype

developing neuron
type: Class
subclass of: neuronal cell phenotype

regenerating neuron
type: Class
subclass of: neuronal cell phenotype

dead cell phenotype
type: Class
subclass of: cellular state phenotype

dying cell phenotype
type: Class
subclass of: cellular state phenotype

necrotic cell phenotype
type: Class
subclass of: dying cell phenotype

apoptotic cell phenotype
type: Class
subclass of: dying cell phenotype

cell cycle phase phenotype
type: Class
subclass of: cellular state phenotype

M phase mitotic cell phenotype
type: Class
comment: mitotic cell phenotype
subclass of: cell cycle phase phenotype

S phase mitotic cell phenotype
type: Class
comment: DNA replicated mitotic cell phenotype
subclass of: cell cycle phase phenotype

molecular localization phenotype
type: Class
subclass of: molecular phenotype

NF-KappaB p65 translocation phenotype
type: Class
subclass of: molecular localization phenotype

molecular expression phenotype
type: Class
subclass of: molecular phenotype

neuronal morphology phenotype
type: Class
subclass of: morphological phenotype

blebbed neurite phenotype
type: Class
subclass of: neuronal morphology phenotype

branched neurite phenotype
type: Class
subclass of: neuronal morphology phenotype

defasciculated axon bundles phenotype
type: Class
subclass of: neuronal morphology phenotype

elongated neurite phenotype
type: Class
subclass of: neuronal morphology phenotype

fasciculated axons phenotype
type: Class
subclass of: neuronal morphology phenotype

shortened neurite phenotype
type: Class
subclass of: neuronal morphology phenotype

rounded cell phenotype
type: Class
subclass of: morphological phenotype

shrunken cell phenotype
type: Class
subclass of: morphological phenotype

blebbed axon phenotype
type: Class
subclass of: blebbed neurite phenotype

blebbed dendrite phenotype
type: Class
subclass of: blebbed neurite phenotype